Yeast Concentration and Viability
Yeast Concentration & Viability
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Yeast Concentration of Pure Cultures
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Count & Viability for Brewery Fermentation
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Count & Viability in Corn Mash Fermentation
Technical Resources & Publications
Watch a video
demonstration
Yeast Concentration & Viability
Cellometer offers solutions for yeast concentration or concentration and viability for a variety of sample conditions, depending on your needs.

Pure yeast cultures, concentration

Pure yeast cultures, concentration and viability (e.g. ethanol fermentation for beer, wine and other alcoholic beverages)

Heterogeneous yeast cultures (e.g. corn mash and sugar cane)
Yeast Concentration of Pure Cultures
Concentrations of pure yeast cultures are typically performed using brightfield imaging. Unlike most other image-based cell counters on the market, Cellometer instruments can be configured to accurately count cell types, down to 1 micron in size, such as yeast. Cellometer software can also handle various yeast morphologies to give accurate counts.

Single-celled yeast

Budding yeast

Chain-forming yeast
Brightfield cell concentration measurements have been validated using Cellometer.
For more information, download the application note Yeast Concentration and Viability using
Image-Based Fluorescence Analysis
Count & Viability for Brewery Fermentation
| Cellometer System for Single Fluorescence Yeast Concentration & Viability |
Instrument |
Cellometer Vision, 10x Magnification
Cellometer Auto X4, 10x Magnification |
Counting Chambers |
PD100
SD100
|
Brightfield image of yeast cells
acquired by Cellometer Vision
Fluorescent image of oxonol
stained yeast
Cellometer Vision incorporates image-based cell counting and fluorescence detection in a compact and easy-to-use instrument for generating yeast count and viability measurements. By providing more consistent results with less effort than manual methods, Cellometer Vision is ideal for use in fermentation processes in the brewing and bio fuel industries.
While a variety of methods exist to assess yeast viability, each one has specific drawbacks that make it less than ideal for use in a production environment requiring consistent and accurate results. Although culture-based methods can be used to determine yeast viability, staining techniques and direct observation are more commonly used in fermentation processes. The most widely used stain in the brewing industry, for example, is methylene blue. Live cells exclude or reduce the dye while dead cells stain blue. Manual counting of both live and dead cells on a hemacytometer is performed under a microscope to determine concentration and viability, but is a time-consuming and labor intensive process. More importantly, the methylene blue assay has been reported to produce inconsistent results and analysis can be subjective. Errors in cell counting, viability measurements, and data recording ultimately lead to inconsistent fermentation performance.
Use of the fluorescent dye oxonol (bis-(1,3-dibutylbarbituric acid)trimethine oxonol(DiBAC4(3)), an anionic membrane potential dye that preferentially stains dead cells, has been reported as a reliable and accurate method to assess yeast viability. Cellometer Vision automatically counts total and oxonol positive dead yeast cells addressing the need for simple, rapid counting and viability testing of yeast cells. By capturing both brightfield and fluorescent images from the same sample, the software determines total cell count and concentration and determines viability, typically in less than 60 seconds.
Counting results box displays brightfield and fluorescent cell count, mean size,
concentration & viability percentage.
Method
Running Assay:
- Take 20µl of yeast sample and mix with oxonol to obtain a final concentration of 1.5µg/ml and mix well by pipetting up and down.
- Load 20µL of sample into the disposable counting chamber.
- Allow cells to settle in chamber for one minute.
- Insert chamber into Cellometer Vision.
- Select assay from drop-down menu.
- Enter sample ID manually or scan in with barcode reader.
- Preview cell images and click 'Count' to begin analysis.
- Review images and counting results on-screen.
- Count, concentration, and viability data can be automatically saved or printed.
Results
Total counted yeast cells are indicated on-screen by green circles in the brightfield image (Figure 1). Dead cells stained with oxonol are indicated as fluorescent positive green circles in the fluorescent image (Figure 2). Cellometer software automatically calculates cell count, concentration, mean cell size, and viability and displays results. Cell size distribution histograms (Figure 6), data files, and cell images can be instantly created, and saved for further analysis or for quality control record keeping.

Figure 1. Total counted yeast
cells are indicated on-screen
by green circles |

Figure 2. Fluorescent image
showing oxonol stained dead
cells (green circles), and
live cells (red circles) |
Figure 3. Total yeast count and concentration (BrightField), dead cell concentration
(Fluorescence) and viability percentage are displayed on-screen immediately
after analysis. Mean diameter of cells is also reported.
Yeast Type |
Viability % |
A |
88.5 |
B |
89.5 |
C |
73.2 |
D |
78.7 |
E |
77.6 |
F |
5.1 |
Figure 4. Yeast viability results for a variety of strains of commercially
available dry yeast tested with the Cellometer Vision after rehydration
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Viability |
Concentration |
Mean Size |
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9.14X106 |
4.9 |
CV |
0.2% |
5.4% |
2.4% |
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|
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5.92X106 |
5.4 |
CV |
4.1% |
13.3% |
1.7% |
|
|
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1.2X107 |
5.4 |
CV |
4.2% |
8.8% |
1.8% |
Figure 5. Yeast viability results for rehydrated yeast at various time pointsCV = coefficient of variation
Figure 6. Individual cell size measurements are used to calculate mean cell size, and
generate cell size histograms
Count & Viability in Corn Mash Fermentation
| Cellometer Vision System for Dual Fluorescence Yeast Concentration & Viability |
Instrument |
Cellometer Vision, 10x Magnification |
Optics Modules |
535-401
660-501 |
Counting Chambers |
PD100
SD100
|
Reagent Kit |
Cellometer ViaStain™ Kit for Live/Dead Yeast Concentration Including Stainer Buffer, Fluorescent Dye Mixture |
In research
and development in the biofuel industry, selection of yeast strains (for higher ethanol tolerance) and fermentation
conditions (yeast concentration, temperature, pH, nutrients, etc.) can be studied to optimize fermentation performance.
Yeast viability measurement is needed to identify higher ethanol-tolerant yeast strains, which may prolong the fermentation
cycle and increase biofuel output. In addition, yeast concentration may be optimized to improve fermentation performance.
Cellometer uses an imaging cytometry method for concentration and viability measurements of yeast in corn
mash.
How Does Yeast Count & Viability by Dual Fluorescence Work?
A highly viscous corn mash sample is mixed with a
dilution buffer and stained with nucleus staining dyes.
Live nucleated cells emit green fluorescence when excited by blue light.
Dead cells emit red light when excited by green light.
Live and dead cells are then distinguishable by color and viability is generated as a percentage based on live/total cell count.
Video: Yeast Cell Concentration & Viability in Corn Mash
Cellometer Vision is a line of simple to use, automated cell analyzers with diverse functions. It combines bright field microscopy
and multi-channel fluorescence images to generate cell count and fluorescence data. This video demonstration features the Cellometer
Vision to measure yeast cell concentration and viability in a highly viscous corn mash sample. Watch video.
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